Bioinformatics & High Performance Computing (HPC)

Join CSU's very own Bioinformatics Club!

Dr. Jean Challacombe is a bioinformatics consultant within the College of Agriculture. To submit a request, email agbioinfo@colostate.edu.

Mara Sedlins (Mara.Sedlins@colostate.edu) provides data management consulting services for CSU. She also leads several workshops, including Data and Donuts and Coding and Cookies.

GAUSSI stands for Generating, Analyzing, and Understanding Sensory and Sequencing Information. GAUSSI is a "transdisciplinary graduate training program in biosensing and computational biology."

This annual workshop focuses on using next generation sequencing to analyze diseases in wildlife.

A source of copy/paste guides for running containers on Summit.

Visit the Stat Lab to help with study design, data analysis, and more.

Create a Summit account, access user guides, and start running jobs with Summit.

Tim Kaiser (Tim.Kaiser@colostate.edu) is a high performance computing consultant based at CSU. He can help users with Summit and help program/run other HPC jobs/analyses.

View materials from past workshops with experts in Canada.

Search, post, and reply to questions and answers on this popular tech forum.

Online bioinformatics community with Q&A forums, tutorials, and tools.

Bioinformatics sub-topic in the GitHub community

"Proteomics: Everything You Wanted to Know, But Were Afraid to Ask"

A subreddit dedicated to bioinformatics

Online forum and wiki regarding next generation sequencing.

Searchable database of bioinformatics data, software, and other resources from the Broad Institute.

ExPASy Bioinformatics Resource Portal from the Swiss Institute of Bioinformatics (SIB).

Each year, NAR publishes a database resource issue with details about new and old bioinformatics resources.

Each year, NAR publishes a database resource issue with details about new and old bioinformatics resources.

An online bioinformatics portal from the University of Pittsburgh.